Linux, MySQL, PhP, Perl... » Errors http://linux.bgsnow.com Fri, 18 Jun 2010 16:30:03 +0000 en hourly 1 http://wordpress.org/?v=3.0.1 Exim 'Mail Server Upgrade in Progress' http://linux.bgsnow.com/exim-mail-server-upgrade-in-progress.php http://linux.bgsnow.com/exim-mail-server-upgrade-in-progress.php#comments Tue, 15 Jul 2008 11:37:20 +0000 admin http://linux.bgsnow.com/?p=18 2008-07-15 07:31:41 1KIiku-0005is-DZ == example@example.com R=temp_defer defer (-1): Mail Server Upgrade in Progress.  Message Queued.

This error may appear after upcp on cPanel powered server. It is quite simple to fix it:

#rm /usr/local/cpanel/etc/exim/cf/fail_remote_domains -f

#/scripts/buildeximconf

#/scripts/restartsrv_exim

As you probably understand the above will overwrite any Exim customizations you might have had :)

]]> http://linux.bgsnow.com/exim-mail-server-upgrade-in-progress.php/feed 0 Problems updating with yum http://linux.bgsnow.com/problems-updating-with-yum.php http://linux.bgsnow.com/problems-updating-with-yum.php#comments Sat, 12 Jul 2008 06:53:20 +0000 admin http://linux.bgsnow.com/?p=17 Here is the error I begin to get with yum on some servers running CentOS 5.

root@server:~# yum update -y
Loading "fastestmirror" plugin
Loading mirror speeds from cached hostfile
* base: yum.keepitsecure.net
* update: yum.keepitsecure.net
base                      100% |=========================|  951 B    00:00
update                    100% |=========================|  951 B    00:00
Excluding Packages in global exclude list
Finished
Setting up Update Process
Resolving Dependencies
--> Running transaction check
---> Package pam.i386 0:0.99.6.2-3.27.el5 set to be updated
---> Package net-snmp.x86_64 1:5.3.1-24.el5_2.1 set to be updated
---> Package krb5-devel.i386 0:1.6.1-25.el5 set to be updated
---> Package bash.x86_64 0:3.2-21.el5 set to be updated
---> Package device-mapper.i386 0:1.02.24-1.el5 set to be updated
---> Package e2fsprogs.x86_64 0:1.39-15.el5 set to be updated
---> Package glibc-headers.x86_64 0:2.5-24 set to be updated
---> Package krb5-devel.x86_64 0:1.6.1-25.el5 set to be updated
---> Package openssh.x86_64 0:4.3p2-26.el5 set to be updated
---> Package audit-libs.i386 0:1.6.5-9.el5 set to be updated
---> Package ghostscript.i386 0:8.15.2-9.3.el5 set to be updated
---> Package libselinux.x86_64 0:1.33.4-5.el5 set to be updated
---> Package glibc-devel.i386 0:2.5-24 set to be updated
---> Package dhclient.x86_64 12:3.0.5-13.el5 set to be updated
---> Package libX11.i386 0:1.0.3-9.el5 set to be updated
---> Package sudo.x86_64 0:1.6.8p12-12.el5 set to be updated
---> Package ghostscript.x86_64 0:8.15.2-9.3.el5 set to be updated
---> Package apr-util.x86_64 0:1.2.7-7.el5 set to be updated
---> Package glibc.x86_64 0:2.5-24 set to be updated
---> Package krb5-libs.i386 0:1.6.1-25.el5 set to be updated
---> Package e2fsprogs-devel.x86_64 0:1.39-15.el5 set to be updated
---> Package ntsysv.x86_64 0:1.3.30.1-2 set to be updated
---> Package net-tools.x86_64 0:1.60-78.el5 set to be updated
---> Package newt.x86_64 0:0.52.2-10.el5 set to be updated
---> Package pam-devel.i386 0:0.99.6.2-3.27.el5 set to be updated
---> Package glibc-common.x86_64 0:2.5-24 set to be updated
---> Package openssh-clients.x86_64 0:4.3p2-26.el5 set to be updated
---> Package libX11-devel.x86_64 0:1.0.3-9.el5 set to be updated
---> Package libselinux.i386 0:1.33.4-5.el5 set to be updated
---> Package tcpdump.x86_64 14:3.9.4-12.el5 set to be updated
---> Package libselinux-python.x86_64 0:1.33.4-5.el5 set to be updated
---> Package iptables.x86_64 0:1.3.5-4.el5 set to be updated
---> Package cups-libs.i386 1:1.2.4-11.18.el5_2.1 set to be updated
---> Package glibc.i686 0:2.5-24 set to be updated
---> Package krb5-libs.x86_64 0:1.6.1-25.el5 set to be updated
---> Package authconfig.x86_64 0:5.3.21-3.el5 set to be updated
---> Package audit-libs.x86_64 0:1.6.5-9.el5 set to be updated
---> Package cups-libs.x86_64 1:1.2.4-11.18.el5_2.1 set to be updated
---> Package psmisc.x86_64 0:22.2-6 set to be updated
---> Package usermode.x86_64 0:1.88-3.el5.1 set to be updated
---> Package openssh-server.x86_64 0:4.3p2-26.el5 set to be updated
---> Package popt.x86_64 0:1.10.2-48.el5 set to be updated
---> Package udev.x86_64 0:095-14.16.el5 set to be updated
---> Package popt.i386 0:1.10.2-48.el5 set to be updated
---> Package diffutils.x86_64 0:2.8.1-15.2.3.el5 set to be updated
---> Package pam.x86_64 0:0.99.6.2-3.27.el5 set to be updated
---> Package chkconfig.x86_64 0:1.3.30.1-2 set to be updated
---> Package audit-libs-python.x86_64 0:1.6.5-9.el5 set to be updated
---> Package perl.x86_64 4:5.8.8-10.el5_2.3 set to be updated
---> Package libuser.x86_64 0:0.54.7-2.el5.5 set to be updated
---> Package libX11.x86_64 0:1.0.3-9.el5 set to be updated
---> Package procps.x86_64 0:3.2.7-9.el5 set to be updated
---> Package policycoreutils.x86_64 0:1.33.12-14.el5 set to be updated
---> Package iproute.x86_64 0:2.6.18-7.el5 set to be updated
---> Package traceroute.x86_64 3:2.0.1-3.el5 set to be updated
---> Package libselinux-devel.x86_64 0:1.33.4-5.el5 set to be updated
---> Package device-mapper.x86_64 0:1.02.24-1.el5 set to be updated
---> Package file.x86_64 0:4.17-13 set to be updated
---> Package net-snmp-libs.x86_64 1:5.3.1-24.el5_2.1 set to be updated
---> Package pam-devel.x86_64 0:0.99.6.2-3.27.el5 set to be updated
---> Package glibc-devel.x86_64 0:2.5-24 set to be updated
---> Package net-snmp-utils.x86_64 1:5.3.1-24.el5_2.1 set to be updated
---> Package e2fsprogs-libs.i386 0:1.39-15.el5 set to be updated
---> Package shadow-utils.x86_64 2:4.0.17-13.el5 set to be updated
---> Package e2fsprogs-libs.x86_64 0:1.39-15.el5 set to be updated
---> Package dbus.x86_64 0:1.0.0-7.el5 set to be updated
---> Package gzip.x86_64 0:1.3.5-10.el5.centos set to be updated
--> Finished Dependency Resolution

Dependencies Resolved

=============================================================================
Package                 Arch       Version          Repository        Size
=============================================================================
Updating:
apr-util                x86_64     1.2.7-7.el5      base               74 k
audit-libs              i386       1.6.5-9.el5      base               67 k
audit-libs              x86_64     1.6.5-9.el5      base               67 k
audit-libs-python       x86_64     1.6.5-9.el5      base               75 k
authconfig              x86_64     5.3.21-3.el5     base              452 k
bash                    x86_64     3.2-21.el5       base              1.9 M
chkconfig               x86_64     1.3.30.1-2       base              160 k
cups-libs               i386       1:1.2.4-11.18.el5_2.1  update            181 k
cups-libs               x86_64     1:1.2.4-11.18.el5_2.1  update            177 k
dbus                    x86_64     1.0.0-7.el5      base              465 k
device-mapper           i386       1.02.24-1.el5    base              656 k
device-mapper           x86_64     1.02.24-1.el5    base              685 k
dhclient                x86_64     12:3.0.5-13.el5  base              280 k
diffutils               x86_64     2.8.1-15.2.3.el5  base              211 k
e2fsprogs               x86_64     1.39-15.el5      base              986 k
e2fsprogs-devel         x86_64     1.39-15.el5      base              626 k
e2fsprogs-libs          i386       1.39-15.el5      base              116 k
e2fsprogs-libs          x86_64     1.39-15.el5      base              116 k
file                    x86_64     4.17-13          base              322 k
ghostscript             i386       8.15.2-9.3.el5   update            5.9 M
ghostscript             x86_64     8.15.2-9.3.el5   update            5.9 M
glibc                   x86_64     2.5-24           base              4.7 M
glibc                   i686       2.5-24           base              5.2 M
glibc-common            x86_64     2.5-24           base               16 M
glibc-devel             i386       2.5-24           base              2.0 M
glibc-devel             x86_64     2.5-24           base              2.4 M
glibc-headers           x86_64     2.5-24           base              602 k
gzip                    x86_64     1.3.5-10.el5.centos  base              103 k
iproute                 x86_64     2.6.18-7.el5     base              813 k
iptables                x86_64     1.3.5-4.el5      base              245 k
krb5-devel              i386       1.6.1-25.el5     base              1.9 M
krb5-devel              x86_64     1.6.1-25.el5     base              1.9 M
krb5-libs               i386       1.6.1-25.el5     base              656 k
krb5-libs               x86_64     1.6.1-25.el5     base              664 k
libX11                  i386       1.0.3-9.el5      base              795 k
libX11                  x86_64     1.0.3-9.el5      base              795 k
libX11-devel            x86_64     1.0.3-9.el5      base              665 k
libselinux              x86_64     1.33.4-5.el5     base               96 k
libselinux              i386       1.33.4-5.el5     base               94 k
libselinux-devel        x86_64     1.33.4-5.el5     base              137 k
libselinux-python       x86_64     1.33.4-5.el5     base               59 k
libuser                 x86_64     0.54.7-2.el5.5   base              448 k
net-snmp                x86_64     1:5.3.1-24.el5_2.1  update            703 k
net-snmp-libs           x86_64     1:5.3.1-24.el5_2.1  update            1.2 M
net-snmp-utils          x86_64     1:5.3.1-24.el5_2.1  update            182 k
net-tools               x86_64     1.60-78.el5      base              367 k
newt                    x86_64     0.52.2-10.el5    base              109 k
ntsysv                  x86_64     1.3.30.1-2       base               24 k
openssh                 x86_64     4.3p2-26.el5     base              283 k
openssh-clients         x86_64     4.3p2-26.el5     base              446 k
openssh-server          x86_64     4.3p2-26.el5     base              258 k
pam                     i386       0.99.6.2-3.27.el5  base              973 k
pam                     x86_64     0.99.6.2-3.27.el5  base              970 k
pam-devel               i386       0.99.6.2-3.27.el5  base              188 k
pam-devel               x86_64     0.99.6.2-3.27.el5  base              189 k
perl                    x86_64     4:5.8.8-10.el5_2.3  update             12 M
policycoreutils         x86_64     1.33.12-14.el5   base              631 k
popt                    x86_64     1.10.2-48.el5    base               71 k
popt                    i386       1.10.2-48.el5    base               69 k
procps                  x86_64     3.2.7-9.el5      base              211 k
psmisc                  x86_64     22.2-6           base               62 k
shadow-utils            x86_64     2:4.0.17-13.el5  base              1.1 M
sudo                    x86_64     1.6.8p12-12.el5  base              223 k
tcpdump                 x86_64     14:3.9.4-12.el5  base              458 k
traceroute              x86_64     3:2.0.1-3.el5    base               40 k
udev                    x86_64     095-14.16.el5    base              2.4 M
usermode                x86_64     1.88-3.el5.1     base              157 k

Transaction Summary
=============================================================================
Install      0 Package(s)
Update      67 Package(s)
Remove       0 Package(s)

Total download size: 83 M
Downloading Packages:
Running rpm_check_debug
Running Transaction Test
Finished Transaction Test

Transaction Check Error:
file /usr/lib/perl5/5.8.8/pod/perldiag.pod from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/c2ph.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/cpan.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/dprofpp.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/enc2xs.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/find2perl.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/h2ph.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/h2xs.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/instmodsh.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/libnetcfg.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/perlbug.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/perlcc.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/perldiag.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/perlivp.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/piconv.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/pl2pm.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/pod2html.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/pod2latex.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/pod2man.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/pod2text.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/pod2usage.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/podchecker.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/podselect.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/prove.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/psed.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/pstruct.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/s2p.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/splain.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2
file /usr/share/man/man1/xsubpp.1.gz from install of perl-5.8.8-10.el5_2.3 conflicts with file from package perl-5.8.8-10.el5_0.2

Error Summary
-------------

Partial solution:

First it is obvious that perl cannot be upgraded because of conflicts. See what happens if we try to upgrade glibc:

root@server:~# yum update glibc
Loading "fastestmirror" plugin
Loading mirror speeds from cached hostfile
* base: yum.keepitsecure.net
* update: yum.keepitsecure.net
base                      100% |=========================|  951 B    00:00
update                    100% |=========================|  951 B    00:00
Excluding Packages in global exclude list
Finished
Setting up Update Process
Resolving Dependencies
--> Running transaction check
---> Package glibc.i686 0:2.5-24 set to be updated
--> Processing Dependency: glibc-common = 2.5-24 for package: glibc
--> Processing Dependency: glibc = 2.5-18.el5_1.1 for package: glibc-headers
--> Processing Dependency: glibc = 2.5-18.el5_1.1 for package: glibc-devel
--> Processing Dependency: glibc = 2.5-18.el5_1.1 for package: glibc-devel
---> Package glibc.x86_64 0:2.5-24 set to be updated
--> Running transaction check
---> Package glibc-devel.x86_64 0:2.5-24 set to be updated
---> Package glibc-headers.x86_64 0:2.5-24 set to be updated
---> Package glibc-common.x86_64 0:2.5-24 set to be updated
--> Finished Dependency Resolution

Dependencies Resolved

=============================================================================
Package                 Arch       Version          Repository        Size
=============================================================================
Updating:
glibc                   i686       2.5-24           base              5.2 M
glibc                   x86_64     2.5-24           base              4.7 M
glibc-common            x86_64     2.5-24           base               16 M
Updating for dependencies:
glibc-devel             x86_64     2.5-24           base              2.4 M
glibc-headers           x86_64     2.5-24           base              602 k

Transaction Summary
=============================================================================
Install      0 Package(s)
Update       5 Package(s)
Remove       0 Package(s)

Total download size: 29 M
Is this ok [y/N]: y
Downloading Packages:
Running rpm_check_debug
ERROR with rpm_check_debug vs depsolve:
Package glibc-devel needs glibc = 2.5-18.el5_1.1, this is not available.
Package glibc-devel needs glibc-headers = 2.5-18.el5_1.1, this is not available.
Package glibc-devel needs glibc-headers = 2.5-18.el5_1.1, this is not available.
Package glibc-devel needs glibc = 2.5-18.el5_1.1, this is not available.
Complete!

This time the problem is dependencies are not resolved for glibc-devel.

However, we can still update packages which do not depend either on perl or on glibc. For example traceroute:

root@server:~# yum update traceroute
Loading "fastestmirror" plugin
Loading mirror speeds from cached hostfile
* base: yum.keepitsecure.net
* update: yum.keepitsecure.net
base                      100% |=========================|  951 B    00:00
update                    100% |=========================|  951 B    00:00
Excluding Packages in global exclude list
Finished
Setting up Update Process
Resolving Dependencies
--> Running transaction check
---> Package traceroute.x86_64 3:2.0.1-3.el5 set to be updated
--> Finished Dependency Resolution

Dependencies Resolved

=============================================================================
Package                 Arch       Version          Repository        Size
=============================================================================
Updating:
traceroute              x86_64     3:2.0.1-3.el5    base               40 k

Transaction Summary
=============================================================================
Install      0 Package(s)
Update       1 Package(s)
Remove       0 Package(s)

Total download size: 40 k
Is this ok [y/N]: y
Downloading Packages:
Running rpm_check_debug
Running Transaction Test
Finished Transaction Test
Transaction Test Succeeded
Running Transaction
Updating  : traceroute                   ######################### [1/2]
Cleanup   : traceroute                   ######################### [2/2]

Updated: traceroute.x86_64 3:2.0.1-3.el5
Complete!

Complete Solution

Until now (Sat Jul 12 09:49:48 EEST 2008) I have not found a complete solution yet. There are many recommendations like uninstalling conflicting packages (perl and glibs - which does not seem a good thing to test on a production server :) ) I have read also about running 'yum clean all && yum upgrade' which does not help at all either :)

I think this problem occurs only with CentOS 5 x64 architecture. Adding 32 bit repositories might help but again does not seem a good idea to me :)

As always, I will wait for a few days (nothing urgent to upgrade at my end) and see if the problem solves by itself :) Hopefully the repositories will be fixed to solve the dependencies. If not, I will have to think of something :)

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